Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: COL1A1 ENSXETG00000003374

.

Description

collagen, type I, alpha 1 [Source:Xenbase;Acc:XB-GENE-6258379]

Location

Primary_assembly 10: 18,236,515-18,262,663 forward strand.

UCB_Xtro_10.0:CM004452.2

About this gene

This gene has 4 transcripts (splice variants), 186 orthologues and 39 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000007330.4	COL1A1-201	5681	1449aa	ENSXETP00000007330.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	L7N2N3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000076901.2	COL1A1-202	5573	1413aa	ENSXETP00000074710.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8QYK8	-
ENSXETT00000070994.2	COL1A1-203	5546	1404aa	ENSXETP00000096072.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8SCS1	-
ENSXETT00000092252.2	COL1A1-204	5465	1377aa	ENSXETP00000085063.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8RI52	-

.

Summary

.

.