Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMARCAL1 ENSXETG00000000465

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Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:Xenbase;Acc:XB-GENE-493391]

Location

Primary_assembly 9: 86,331,349-86,356,203 reverse strand.

UCB_Xtro_10.0:CM004451.2

About this gene

This gene has 4 transcripts (splice variants), 194 orthologues and 31 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000104219.2	SMARCAL1-201	3761	942aa	ENSXETP00000089340.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8RW16 A0A8J1ISP2 Q0P4U8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000094942.2	SMARCAL1-202	3623	920aa	ENSXETP00000075199.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8R1K0	-
ENSXETT00000066836.2	SMARCAL1-203	3496	942aa	ENSXETP00000069927.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8QN40 A0A8J1ISP2 Q0P4U8	-
ENSXETT00000000989.4	SMARCAL1-204	3476	942aa	ENSXETP00000000989.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S6JUW5 A0A8J1ISP2 Q0P4U8	-

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Summary

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