Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CASC3 ENSXETG00000024395

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Description

CASC3, exon junction complex subunit [Source:Xenbase;Acc:XB-GENE-969211]

Location

Primary_assembly 10: 8,964,404-8,998,588 reverse strand.

UCB_Xtro_10.0:CM004452.2

About this gene

This gene has 7 transcripts (splice variants) and 201 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000094787.2	CASC3-202	3821	700aa	ENSXETP00000091593.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8S9U9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000091686.2	CASC3-201	7443	675aa	ENSXETP00000088694.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8S658	-
ENSXETT00000052759.5	CASC3-204	5881	678aa	ENSXETP00000052759.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6X519	-
ENSXETT00000083122.2	CASC3-206	4584	668aa	ENSXETP00000093411.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8SJN0	-
ENSXETT00000078837.2	CASC3-203	3541	674aa	ENSXETP00000074239.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8QXA2	-
ENSXETT00000067699.2	CASC3-207	2046	681aa	ENSXETP00000080132.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8REH4	-
ENSXETT00000078802.2	CASC3-205	1017	338aa	ENSXETP00000081733.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8RIY1	-

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Summary

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