Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: scn1a ENSXETG00000020846

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Description

sodium channel, voltage gated, type I alpha subunit [Source:Xenbase;Acc:XB-GENE-978019]

Location

Primary_assembly 9: 69,876,374-70,017,684 forward strand.

UCB_Xtro_10.0:CM004451.2

About this gene

This gene has 5 transcripts (splice variants), 169 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000081630.2	scn1a-201	12211	2027aa	ENSXETP00000087310.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8S1S3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000045061.5	scn1a-202	12142	2004aa	ENSXETP00000045061.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6UXH2	-
ENSXETT00000082590.2	scn1a-203	12022	1964aa	ENSXETP00000074019.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8QNY0	-
ENSXETT00000091931.2	scn1a-205	11652	1836aa	ENSXETP00000067248.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8QCC2	-
ENSXETT00000080642.2	scn1a-204	5699	1837aa	ENSXETP00000087826.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8S535	-

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Summary

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