Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: mbd1 ENSXETG00000040845

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Description

methyl-CpG binding domain protein 1 [Source:Xenbase;Acc:XB-GENE-920305]

Location

Primary_assembly 8: 1,173,537-1,185,389 forward strand.

UCB_Xtro_10.0:CM004450.2

About this gene

This gene has 6 transcripts (splice variants), 178 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000113664.1	mbd1-201	5135	632aa	ENSXETP00000112830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JXT9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000119797.1	mbd1-205	5769	577aa	ENSXETP00000108426.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JKE8	-
ENSXETT00000108562.1	mbd1-202	5384	631aa	ENSXETP00000116745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803K8L8	-
ENSXETT00000107529.1	mbd1-204	3010	582aa	ENSXETP00000104430.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803J988	-
ENSXETT00000115569.1	mbd1-203	2769	632aa	ENSXETP00000110805.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JXT9	-
ENSXETT00000064259.3	mbd1-206	1881	598aa	ENSXETP00000058766.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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