Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CHRNA1 ENSXETG00000044131

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Description

cholinergic receptor, nicotinic alpha 1 [Source:Xenbase;Acc:XB-GENE-977139]

Location

Primary_assembly 9: 66,275,467-66,300,586 forward strand.

UCB_Xtro_10.0:CM004451.2

About this gene

This gene has 10 transcripts (splice variants), 259 orthologues and 47 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000097805.2	CHRNA1-207	2015	466aa	ENSXETP00000084474.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8RPQ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000054211.4	CHRNA1-203	2007	457aa	ENSXETP00000054211.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6RLA9	-
ENSXETT00000080005.2	CHRNA1-206	1961	448aa	ENSXETP00000090827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8SC49	-
ENSXETT00000078050.2	CHRNA1-201	1885	457aa	ENSXETP00000078339.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8RBH5	-
ENSXETT00000054207.4	CHRNA1-208	1877	457aa	ENSXETP00000054207.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6RLM5	-
ENSXETT00000082383.2	CHRNA1-210	1872	459aa	ENSXETP00000066945.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8QBL3	-
ENSXETT00000103942.2	CHRNA1-202	1870	457aa	ENSXETP00000098064.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8SXA8	-
ENSXETT00000081901.2	CHRNA1-209	1830	445aa	ENSXETP00000098458.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8SUK0	-
ENSXETT00000069609.2	CHRNA1-205	1393	294aa	ENSXETP00000094052.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8SAX6	-
ENSXETT00000095575.2	CHRNA1-204	1153	377aa	ENSXETP00000099048.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8SVU8	-

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Summary

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