Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: vps39 ENSXETG00000000301

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Description

VPS39 HOPS complex subunit [Source:Xenbase;Acc:XB-GENE-982373]

Location

Primary_assembly 8: 113,990,821-114,021,010 forward strand.

UCB_Xtro_10.0:CM004450.2

About this gene

This gene has 3 transcripts (splice variants), 209 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000053486.4	vps39-203	5017	846aa	ENSXETP00000053486.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6VBU1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000000598.5	vps39-201	5127	664aa	ENSXETP00000000598.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6TFT8	-
ENSXETT00000068991.2	vps39-202	5091	652aa	ENSXETP00000078976.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8QZF4	-

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Summary

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