Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL2A1 ENSXETG00000010655

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Description

collagen, type II, alpha 1 [Source:Xenbase;Acc:XB-GENE-6258353]

Location

Primary_assembly 2: 143,714,038-143,762,149 forward strand.

UCB_Xtro_10.0:CM004444.2

About this gene

This gene has 2 transcripts (splice variants), 235 orthologues and 39 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000043834.4	COL2A1-201	6145	1489aa	ENSXETP00000043834.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6WIP1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000023334.4	COL2A1-202	5806	1422aa	ENSXETP00000023334.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7B315	-

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Summary

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