Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PDLIM1 ENSXETG00000008826

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Description

PDZ and LIM domain 1 [Source:Xenbase;Acc:XB-GENE-1004691]

Location

Primary_assembly 7: 39,247,402-39,284,797 reverse strand.

UCB_Xtro_10.0:CM004449.2

About this gene

This gene has 3 transcripts (splice variants), 218 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000110561.1	PDLIM1-203	1575	407aa	ENSXETP00000110822.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JS51	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000019398.4	PDLIM1-201	1468	325aa	ENSXETP00000019398.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6VLA4	-
ENSXETT00000110656.1	PDLIM1-202	1399	353aa	ENSXETP00000109649.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JNV6	-

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Summary

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