Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CAPN1 ENSXETG00000023299

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Description

calpain 1, (mu/I) large subunit [Source:Xenbase;Acc:XB-GENE-990196]

Location

Primary_assembly 4: 31,619,552-31,653,772 forward strand.

UCB_Xtro_10.0:CM004446.2

About this gene

This gene has 3 transcripts (splice variants), 226 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000050337.5	CAPN1-203	4972	713aa	ENSXETP00000050337.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q66IH0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000072619.2	CAPN1-201	4531	713aa	ENSXETP00000094973.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q66IH0	-
ENSXETT00000073241.2	CAPN1-202	4416	709aa	ENSXETP00000097687.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8SX43	-

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Summary

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