Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ppfibp1 ENSXETG00000016522

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Description

PTPRF interacting protein, binding protein 1 (liprin beta 1) [Source:Xenbase;Acc:XB-GENE-1014146]

Location

Primary_assembly 3: 2,591,746-2,674,464 reverse strand.

UCB_Xtro_10.0:CM004445.2

About this gene

This gene has 5 transcripts (splice variants), 288 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000088008.2	ppfibp1-202	8825	1064aa	ENSXETP00000089527.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8RXP5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000106439.1	ppfibp1-201	11346	973aa	ENSXETP00000117810.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8RG96	-
ENSXETT00000102727.2	ppfibp1-203	6155	973aa	ENSXETP00000080659.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8RG96	-
ENSXETT00000104934.2	ppfibp1-204	5627	983aa	ENSXETP00000064713.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8PY51	-
ENSXETT00000036020.5	ppfibp1-205	3049	912aa	ENSXETP00000036020.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6UB02	-

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Summary

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