Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ppfia1 ENSXETG00000003798

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Description

protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 [Source:Xenbase;Acc:XB-GENE-984553]

Location

Primary_assembly 4: 14,490,055-14,555,971 forward strand.

UCB_Xtro_10.0:CM004446.2

About this gene

This gene has 9 transcripts (splice variants), 215 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000008265.5	ppfia1-208	6448	1288aa	ENSXETP00000008265.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6UFF8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000103768.2	ppfia1-201	7499	1282aa	ENSXETP00000080586.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8RGP5	-
ENSXETT00000082136.2	ppfia1-202	7496	1281aa	ENSXETP00000100409.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8SRE4	-
ENSXETT00000067698.2	ppfia1-203	7490	1279aa	ENSXETP00000069714.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8QMH0	-
ENSXETT00000099888.2	ppfia1-204	7472	1273aa	ENSXETP00000086842.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8S259	-
ENSXETT00000066564.2	ppfia1-205	7469	1272aa	ENSXETP00000075073.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8QPI5	-
ENSXETT00000101211.2	ppfia1-206	7409	1252aa	ENSXETP00000092705.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8S3U6	-
ENSXETT00000079987.2	ppfia1-207	7389	1258aa	ENSXETP00000097396.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8SWT0	-
ENSXETT00000008270.5	ppfia1-209	3624	1207aa	ENSXETP00000008270.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6TQ77	-

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Summary

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