Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HPCAL1 ENSXETG00000003521

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Description

hippocalcin-like 1 [Source:Xenbase;Acc:XB-GENE-947040]

Location

Primary_assembly 5: 138,365,896-138,431,463 forward strand.

UCB_Xtro_10.0:CM004447.2

About this gene

This gene has 3 transcripts (splice variants), 218 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000007606.5	HPCAL1-203	1572	258aa	ENSXETP00000007606.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S6KDG2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000117373.1	HPCAL1-201	2913	167aa	ENSXETP00000115782.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q05AT2	-
ENSXETT00000070479.2	HPCAL1-202	1682	202aa	ENSXETP00000101060.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8ST07	-

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Summary

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