Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CAPN1 ENSUMAG00000008452

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Description

calpain 1 [Source:NCBI gene;Acc:103679450]

Location

Primary_assembly KK498772.1: 1,353,512-1,383,431 forward strand.

About this gene

This gene has 9 transcripts (splice variants), 224 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSUMAT00000015305.1	CAPN1-205	2223	740aa	ENSUMAP00000012895.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452TX83	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSUMAT00000015317.1	CAPN1-206	2178	725aa	ENSUMAP00000012903.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452TX43	-
ENSUMAT00000015320.1	CAPN1-207	2169	722aa	ENSUMAP00000012906.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452TWW4	-
ENSUMAT00000015130.1	CAPN1-203	2166	721aa	ENSUMAP00000012751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452TWS0	-
ENSUMAT00000015182.1	CAPN1-204	2148	715aa	ENSUMAP00000012798.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452TWW5	-
ENSUMAT00000015382.1	CAPN1-208	2145	714aa	ENSUMAP00000012964.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452TX98	-
ENSUMAT00000015401.1	CAPN1-209	2142	713aa	ENSUMAP00000012980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452TXJ2	-
ENSUMAT00000014920.1	CAPN1-201	2139	712aa	ENSUMAP00000012569.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452TWC5	-
ENSUMAT00000015076.1	CAPN1-202	2118	705aa	ENSUMAP00000012702.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452TWM3	-

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Summary

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