Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: rfx1a ENSTNIG00000003294

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Description

regulatory factor X, 1a (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-070424-94]

Location

Chromosome 3: 9,005,967-9,013,696 forward strand.

About this gene

This gene has 2 transcripts (splice variants), 190 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSTNIT00000006025.1	rfx1a-201	2892	963aa	ENSTNIP00000005877.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H3CCA5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSTNIT00000006026.1	rfx1a-202	2040	680aa	ENSTNIP00000005878.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H3CCA6	-

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Summary

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