Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: sqstm1 ENSTRUG00000017345

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Description

sequestosome 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2204]

Location

Primary_assembly CAAJGN020000065.1: 130,694-194,100 forward strand.

About this gene

This gene has 10 transcripts (splice variants) and 208 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSTRUT00000068993.1	sqstm1-203	1414	458aa	ENSTRUP00000081395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674MT16	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSTRUT00000082827.1	sqstm1-202	1449	456aa	ENSTRUP00000063508.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674MQV6	-
ENSTRUT00000084332.1	sqstm1-204	1414	458aa	ENSTRUP00000064170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674MT16	-
ENSTRUT00000084394.1	sqstm1-205	1414	458aa	ENSTRUP00000077650.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674MT16	-
ENSTRUT00000067628.1	sqstm1-206	1408	456aa	ENSTRUP00000061565.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674MQV6	-
ENSTRUT00000070515.1	sqstm1-207	1408	456aa	ENSTRUP00000075792.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674MQV6	-
ENSTRUT00000086736.1	sqstm1-208	1408	456aa	ENSTRUP00000077593.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674MQV6	-
ENSTRUT00000083915.1	sqstm1-209	1408	456aa	ENSTRUP00000058764.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674MQV6	-
ENSTRUT00000065569.1	sqstm1-201	1339	433aa	ENSTRUP00000088256.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674PRK6	-
ENSTRUT00000044590.3	sqstm1-210	1334	416aa	ENSTRUP00000044440.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2V5F6	-

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Summary

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