Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: rpa1 ENSTRUG00000003616

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Description

replication protein A1 [Source:ZFIN;Acc:ZDB-GENE-030912-3]

Location

Primary_assembly 11: 11,134,851-11,149,963 reverse strand.

fTakRub1.2:LR584241.1

About this gene

This gene has 6 transcripts (splice variants), 219 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSTRUT00000008526.3	RPA1-204	2397	600aa	ENSTRUP00000008475.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2S7V3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSTRUT00000090150.1	RPA1-203	2400	559aa	ENSTRUP00000074819.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674NP81	-
ENSTRUT00000078240.1	RPA1-205	2340	539aa	ENSTRUP00000069433.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674N6T3	-
ENSTRUT00000073621.1	RPA1-201	2298	590aa	ENSTRUP00000065279.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674MVP2	-
ENSTRUT00000082325.1	RPA1-202	2292	588aa	ENSTRUP00000063385.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674MQZ4	-
ENSTRUT00000084594.1	RPA1-206	1779	527aa	ENSTRUP00000057611.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674M9I5	-

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Summary

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