Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SEMA3C ENSTRUG00000015957

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Description

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:ZFIN;Acc:ZDB-GENE-050513-5]

Location

Primary_assembly 18: 4,143,038-4,162,000 forward strand.

fTakRub1.2:LR584252.2

About this gene

This gene has 10 transcripts (splice variants), 199 orthologues and 31 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSTRUT00000066702.1	SEMA3C-201	2589	862aa	ENSTRUP00000060290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSTRUT00000060148.1	SEMA3C-206	2280	759aa	ENSTRUP00000080029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000088173.1	SEMA3C-202	2256	751aa	ENSTRUP00000083850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000069080.1	SEMA3C-205	2211	736aa	ENSTRUP00000067700.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000083348.1	SEMA3C-203	2205	734aa	ENSTRUP00000085002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000060563.1	SEMA3C-204	2184	727aa	ENSTRUP00000065426.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000082136.1	SEMA3C-208	2178	725aa	ENSTRUP00000078370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000040942.3	SEMA3C-209	2139	712aa	ENSTRUP00000040800.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2UV25	-
ENSTRUT00000088212.1	SEMA3C-210	2025	674aa	ENSTRUP00000074883.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000078547.1	SEMA3C-207	1818	605aa	ENSTRUP00000065886.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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