Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RFX1 ENSTRUG00000010058

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Description

regulatory factor X, 1b (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-041008-101]

Location

Primary_assembly 17: 3,703,305-3,719,850 reverse strand.

fTakRub1.2:LR584239.2

About this gene

This gene has 5 transcripts (splice variants), 177 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSTRUT00000084054.1	RFX1-201	3860	968aa	ENSTRUP00000071623.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSTRUT00000070159.1	RFX1-203	3519	829aa	ENSTRUP00000083235.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000084296.1	RFX1-202	3490	822aa	ENSTRUP00000086468.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000025411.3	RFX1-205	1860	619aa	ENSTRUP00000025308.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2TKV3	-
ENSTRUT00000025412.3	RFX1-204	1578	525aa	ENSTRUP00000025309.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2TKV4	-

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Summary

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