Transcript: ENSSSCT00000030871.4 TRIM55-202

Description

tripartite motif containing 55 [Source:VGNC Symbol;Acc:VGNC:94420]

Location

Primary_assembly 4: 68,487,875-68,530,889 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 25 domains and features and is associated with 1469 variant alleles.

Gene

This transcript is a product of gene ENSSSCG00000006216.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000006812.6	TRIM55-204	2667	540aa	ENSSSCP00000006627.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1LL22 F1RTY9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000023039.4	TRIM55-203	2741	531aa	ENSSSCP00000026421.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0MS04 I3LQP1	-
ENSSSCT00000030871.4	TRIM55-202	1743	444aa	ENSSSCP00000019605.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1C665 I3L6F4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000085441.1	TRIM55-201	870	241aa	ENSSSCP00000068339.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UZE2 A0A8D1LKW0	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,743 bps, Translation length: 444 residues

Version

ENSSSCT00000030871.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSSSCT00000030871.4 TRIM55-202

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Transcript: ENSSSCT00000030871.4 TRIM55-202

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