Transcript: ENSSSCT00000025406.4 NUP153-204

Description

nucleoporin 153 [Source:VGNC Symbol;Acc:VGNC:90973]

Location

Primary_assembly 7: 13,393,547-13,466,427 reverse strand.

About this transcript

This transcript has 22 exons, is annotated with 66 domains and features, is associated with 2730 variant alleles and maps to 16 oligo probes.

Gene

This transcript is a product of gene ENSSSCG00000026034.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000025406.4	NUP153-204	6094	1468aa	ENSSSCP00000022498.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A481AFG9 A0A8D2A9U1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000044984.3	NUP153-203	5810	1425aa	ENSSSCP00000057981.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BP76 A0A8D1U7P7	-
ENSSSCT00000062257.3	NUP153-202	5732	1431aa	ENSSSCP00000032985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZN32 A0A8D2A5J9	-
ENSSSCT00000047490.3	NUP153-201	5473	1460aa	ENSSSCP00000055208.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BF68 A0A8D1U7X2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 6,094 bps, Translation length: 1,468 residues

Version

ENSSSCT00000025406.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSSSCT00000025406.4 NUP153-204

Summary

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Transcript: ENSSSCT00000025406.4 NUP153-204

Summary

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