Transcript: ENSSSCT00000011192.4 JMJD1C-201

Description

jumonji domain containing 1C [Source:VGNC Symbol;Acc:VGNC:89285]

Location

About this transcript

This transcript has 25 exons, is annotated with 34 domains and features, is associated with 966 variant alleles and maps to 24 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000051269.3	JMJD1C-202	8624	2534aa	ENSSSCP00000044031.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AJG8 A0A8D1ZTU7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000011192.4	JMJD1C-201	8164	2352aa	ENSSSCP00000010901.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SUK0	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 25, Coding exons: 24, Transcript length: 8,164 bps, Translation length: 2,352 residues

Version

ENSSSCT00000011192.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.