Transcript: ENSSSCT00000001345.6 TRIM15-201

Description

tripartite motif containing 15 [Source:VGNC Symbol;Acc:VGNC:94395]

Location

About this transcript

This transcript has 9 exons, is associated with 1137 variant alleles and maps to 9 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000080618.2	TRIM15-203	2068	461aa	ENSSSCP00000073963.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6ICV0 Q9TSW0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000107560.1	TRIM15-207	3119	163aa	ENSSSCP00000081951.1	Nonsense mediated decay	-	-
ENSSSCT00000107558.1	TRIM15-204	2164	281aa	ENSSSCP00000081949.1	Nonsense mediated decay	-	-
ENSSSCT00000107557.1	TRIM15-202	2137	265aa	ENSSSCP00000081948.1	Nonsense mediated decay	-	-
ENSSSCT00000107559.1	TRIM15-206	2019	247aa	ENSSSCP00000081950.1	Nonsense mediated decay	-	-
ENSSSCT00000087806.2	TRIM15-205	2003	268aa	ENSSSCP00000062771.2	Nonsense mediated decay	A0A5G2QG59	-
ENSSSCT00000107561.1	TRIM15-208	1960	192aa	ENSSSCP00000081952.1	Nonsense mediated decay	-	-
ENSSSCT00000001345.6	TRIM15-201	1942	249aa	ENSSSCP00000001314.5	Nonsense mediated decay	A0A2C9F349	-

Summary

Statistics

Exons: 9, Coding exons: 5, Transcript length: 1,942 bps, Translation length: 249 residues

Version

ENSSSCT00000001345.6

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported only [Definitions]