Transcript: ENSSSCT00000030140.3 HERC5-203

Description

HECT and RLD domain containing E3 ubiquitin protein ligase 5 [Source:VGNC Symbol;Acc:VGNC:88850]

Location

Primary_assembly 8: 130,533,883-130,590,835 reverse strand.

About this transcript

This transcript has 23 exons, is annotated with 15 domains and features and is associated with 3936 variant alleles.

Gene

This transcript is a product of gene ENSSSCG00000030548.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000030140.3	HERC5-203	3323	968aa	ENSSSCP00000020915.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LA49	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000073109.1	HERC5-201	3643	927aa	ENSSSCP00000066989.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QS91 A0A8D0ZJC5	-
ENSSSCT00000043896.1	HERC5-202	3219	931aa	ENSSSCP00000058125.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BND2 A0A8D0TI98	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 3,323 bps, Translation length: 968 residues

Version

ENSSSCT00000030140.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSSSCT00000030140.3 HERC5-203

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSSSCT00000030140.3 HERC5-203

Summary

About Us

Get help

Our sister sites

Follow us