Transcript: ENSSSCT00000004003.5 LCK-202

Description

LCK proto-onco, Src family tyrosine kinase [Source:VGNC Symbol;Acc:VGNC:89657]

Location

About this transcript

This transcript has 14 exons, is annotated with 10 domains and features, is associated with 609 variant alleles and maps to 24 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000107090.1	LCK-201	2403	509aa	ENSSSCP00000081488.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D2C922	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000004003.5	LCK-202	2224	509aa	ENSSSCP00000003912.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D2C922 F1SV94	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000107091.1	LCK-203	2094	44aa	ENSSSCP00000081489.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 14, Coding exons: 12, Transcript length: 2,224 bps, Translation length: 509 residues

Version

ENSSSCT00000004003.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.