Transcript: ENSSSCT00000032456.4

Description

TATA-box binding protein associated factor 1 [Source:UniProtKB Gene Name;Acc:I3LP77]

Location

About this transcript

This transcript has 39 exons, is annotated with 69 domains and features, is associated with 1112 variant alleles and maps to 24 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000032456.4	-	7594	1906aa	ENSSSCP00000025903.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LP77	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000053799.3	-	7492	1872aa	ENSSSCP00000058455.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BPL9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 39, Coding exons: 39, Transcript length: 7,594 bps, Translation length: 1,906 residues

Version

ENSSSCT00000032456.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.