Transcript: ENSSSCT00000012318.6 MYD88-201

Description

MYD88 innate immune signal transduction adaptor [Source:NCBI gene (formerly Entrezgene);Acc:396646]

Location

About this transcript

This transcript has 6 exons, is annotated with 17 domains and features, is associated with 351 variant alleles and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000012318.6	MYD88-201	5533	323aa	ENSSSCP00000011996.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140TAK4 A0A8D0S2P3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000069576.2	MYD88-202	4261	251aa	ENSSSCP00000059999.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2Q7F0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 5,533 bps, Translation length: 323 residues

Version

ENSSSCT00000012318.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.