Transcript: ENSSSCT00000006814.5 PDE7A-202

Description

phosphodiesterase 7A [Source:VGNC Symbol;Acc:VGNC:91261]

Location

About this transcript

This transcript has 15 exons, is annotated with 19 domains and features, is associated with 2558 variant alleles and maps to 22 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000006814.5	PDE7A-202	3252	483aa	ENSSSCP00000006629.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1V115 F1RTC1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000058082.2	PDE7A-201	3366	482aa	ENSSSCP00000045494.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ANM9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 15, Coding exons: 13, Transcript length: 3,252 bps, Translation length: 483 residues

Version

ENSSSCT00000006814.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.