Transcript: ENSSSCT00000005490.4 NR2E3-201

Description

nuclear receptor subfamily 2 group E member 3 [Source:VGNC Symbol;Acc:VGNC:90879]

Location

About this transcript

This transcript has 8 exons, is annotated with 36 domains and features and is associated with 288 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000005490.4	NR2E3-201	1242	413aa	ENSSSCP00000005353.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SX09 F1SIS0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSSSCT00000049751.2	NR2E3-202	1200	399aa	ENSSSCP00000032139.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZKP8 A0A4X1SYP3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,242 bps, Translation length: 413 residues

Version

ENSSSCT00000005490.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.