Transcript: ENSSSCT00000001686.5 SYNGAP1-204

Description

synaptic Ras GTPase activating protein 1 [Source:VGNC Symbol;Acc:VGNC:93664]

Location

About this transcript

This transcript has 19 exons, is annotated with 27 domains and features, is associated with 337 variant alleles and maps to 2 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000096236.1	SYNGAP1-201	4232	1343aa	ENSSSCP00000079552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FKW6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000078773.2	SYNGAP1-202	8422	1300aa	ENSSSCP00000069488.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QZC4	-
ENSSSCT00000041728.3	SYNGAP1-203	4081	1293aa	ENSSSCP00000058216.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BNM2	-
ENSSSCT00000099075.1	SYNGAP1-205	3855	1284aa	ENSSSCP00000074909.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F7Z3	-
ENSSSCT00000001686.5	SYNGAP1-204	3774	1257aa	ENSSSCP00000001642.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RZR5	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 3,774 bps, Translation length: 1,257 residues

Version

ENSSSCT00000001686.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Frameshift introns

Frameshift introns occur at intron number(s) 13, 18.