Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
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ID History
- Gene history

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Gene: RNF121 ENSSSCG00000023796

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Description

interleukin 18 binding protein [Source:VGNC Symbol;Acc:VGNC:89089]

Location

Primary_assembly 9: 6,488,806-6,587,324 forward strand.

Sscrofa11.1:CM000820.5

About this gene

This gene has 4 transcripts (splice variants) and 203 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000089496.2	RNF121-203	1988	328aa	ENSSSCP00000067421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QTE6 A0A8D0W2W0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000036334.4	RNF121-201	1999	327aa	ENSSSCP00000029340.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1JK65 K7GN89	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000016151.5	RNF121-202	1576	167aa	ENSSSCP00000015719.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1V408 F1SUY6	-
ENSSSCT00000095225.1	RNF121-204	1541	179aa	ENSSSCP00000077441.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FDV4	-

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Summary

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