Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TRIM3 ENSSSCG00000059302

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Description

tripartite motif containing 3 [Source:UniProtKB Gene Name;Acc:A0A287ABR7]

Location

Primary_assembly 9: 3,272,798-3,282,366 forward strand.

Sscrofa11.1:CM000820.5

About this gene

This gene has 3 transcripts (splice variants), 256 orthologues and 75 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000038329.3	TRIM3-203	2909	634aa	ENSSSCP00000052751.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B897	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000015976.5	TRIM3-201	2864	620aa	ENSSSCP00000015555.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RMN8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000056279.3	TRIM3-202	2858	618aa	ENSSSCP00000041329.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ABR7 A0A4X1SFY2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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