Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RNF130 ENSSSCG00000057993

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Description

ring finger protein 130 [Source:UniProtKB Gene Name;Acc:A0A4X1VQD0]

Location

Primary_assembly 2: 78,515,733-78,670,028 forward strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 5 transcripts (splice variants), 213 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000056214.3	RNF130-205	7131	486aa	ENSSSCP00000057827.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BMH2 A0A8D1L7M9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000045463.2	RNF130-201	6428	403aa	ENSSSCP00000031709.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZJQ3 A0A8D1JDG4	-
ENSSSCT00000102044.1	RNF130-204	6333	431aa	ENSSSCP00000078130.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VQD0 A0A8W4FFW0	-
ENSSSCT00000015306.6	RNF130-203	2201	384aa	ENSSSCP00000014898.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VVZ1 F1S5Q0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000035144.4	RNF130-202	1469	419aa	ENSSSCP00000028761.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7GLM9	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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