Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: BAG1 ENSSSCG00000010996

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Description

BAG cochaperone 1 [Source:VGNC Symbol;Acc:VGNC:96502]

Location

Primary_assembly 10: 33,227,337-33,242,230 forward strand.

Sscrofa11.1:CM000821.5

About this gene

This gene has 7 transcripts (splice variants) and 197 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000077020.2	BAG1-205	1942	322aa	ENSSSCP00000072040.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R6S9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000107043.1	BAG1-204	4399	236aa	ENSSSCP00000081445.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0X875	-
ENSSSCT00000066892.2	BAG1-203	1952	230aa	ENSSSCP00000060187.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QPH3 A0A8D0JWU6	-
ENSSSCT00000012037.6	BAG1-207	1903	251aa	ENSSSCP00000011729.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0P701 F1SE85	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000107044.1	BAG1-206	1768	208aa	ENSSSCP00000081446.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSCT00000107042.1	BAG1-202	1764	251aa	ENSSSCP00000081444.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0P701	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000107041.1	BAG1-201	1746	251aa	ENSSSCP00000081443.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0P701	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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