Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NSFL1C ENSSSCG00000007187

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Description

NSFL1 cofactor [Source:VGNC Symbol;Acc:VGNC:95704]

Location

Primary_assembly 17: 33,869,527-33,892,064 forward strand.

Sscrofa11.1:CM000828.5

About this gene

This gene has 4 transcripts (splice variants), 224 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000087507.2	NSFL1C-201	1374	372aa	ENSSSCP00000066898.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R8G1 A0A8D1VX36	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000007863.5	NSFL1C-202	2623	370aa	ENSSSCP00000007652.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SK04 F1S880	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000055102.3	NSFL1C-203	2572	353aa	ENSSSCP00000043048.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AGR0 A0A4X1SK86	-
ENSSSCT00000106034.1	NSFL1C-204	2548	345aa	ENSSSCP00000078535.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SL19 A0A8W4FJQ3	-

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Summary

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