Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: DCAF6 ENSSSCG00000006303

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Description

DDB1 and CUL4 associated factor 6 [Source:VGNC Symbol;Acc:VGNC:87177]

Location

Primary_assembly 4: 82,911,577-83,069,699 reverse strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 5 transcripts (splice variants), 226 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000051977.3	DCAF6-203	3542	942aa	ENSSSCP00000038445.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A3W6 A0A4X1V4D0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000037338.3	DCAF6-202	3483	928aa	ENSSSCP00000057858.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A481ATW2 A0A4X1V4E4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000063178.3	DCAF6-204	3449	911aa	ENSSSCP00000040935.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AAG2 A0A4X1V4K0	-
ENSSSCT00000006908.5	DCAF6-205	3422	902aa	ENSSSCP00000006720.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1GTT7 F1RPU9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000025175.4	DCAF6-201	3000	901aa	ENSSSCP00000027434.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1V8Y5 I3LTI7	-

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Summary

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