Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CACHD1 ENSSSCG00000004829

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Description

cache domain containing 1 [Source:VGNC Symbol;Acc:VGNC:86116]

Location

Primary_assembly 6: 147,775,073-148,305,330 reverse strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 3 transcripts (splice variants), 215 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000080925.2	CACHD1-203	5614	1283aa	ENSSSCP00000064117.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QJJ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000005331.5	CACHD1-202	5195	1216aa	ENSSSCP00000005201.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SNS3	-
ENSSSCT00000004217.5	CACHD1-201	2062	318aa	ENSSSCP00000004122.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1S816	-

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Summary

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