Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SNX6 ENSSSCG00000040912

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Description

sorting nexin 6 [Source:NCBI gene (formerly Entrezgene);Acc:100154775]

Location

Primary_assembly 7: 65,156,478-65,205,239 forward strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 5 transcripts (splice variants), 222 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000067070.2	SNX6-204	2538	418aa	ENSSSCP00000065906.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QPB2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000059438.3	SNX6-202	3297	397aa	ENSSSCP00000043080.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AGT7	-
ENSSSCT00000065561.3	SNX6-203	2434	294aa	ENSSSCP00000036956.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZZQ0 A0A8D0XQ91	-
ENSSSCT00000049169.3	SNX6-201	1146	381aa	ENSSSCP00000058533.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BQY8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000090309.2	SNX6-205	1131	376aa	ENSSSCP00000067520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QZZ6 A0A8D1WVN6	-

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Summary

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