Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SPTBN1 ENSSSCG00000040786

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Description

spectrin beta, non-erythrocytic 1 [Source:VGNC Symbol;Acc:VGNC:93436]

Location

Primary_assembly 3: 86,585,054-86,784,149 reverse strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 6 transcripts (splice variants), 306 orthologues and 40 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000062533.3	SPTBN1-204	8496	2365aa	ENSSSCP00000031872.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BDN2 A0A8D0THT1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000065413.3	SPTBN1-205	8496	2365aa	ENSSSCP00000054202.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0THT1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000046129.3	SPTBN1-206	8046	2215aa	ENSSSCP00000052461.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B8N2 A0A8D1MMS7	-
ENSSSCT00000042217.3	SPTBN1-203	7075	2214aa	ENSSSCP00000045734.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287APB3 A0A8D1HFF1	-
ENSSSCT00000100424.1	SPTBN1-201	6887	2155aa	ENSSSCP00000079443.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0MKP1 A0A8W4FJE0	-
ENSSSCT00000066173.3	SPTBN1-202	6883	2150aa	ENSSSCP00000033079.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZNC7 A0A8D1B7E7	-

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Summary

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