Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CACUL1 ENSSSCG00000038222

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Description

CDK2 associated cullin domain 1 [Source:VGNC Symbol;Acc:VGNC:86132]

Location

Primary_assembly 14: 128,681,907-128,749,020 reverse strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 3 transcripts (splice variants), 197 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000036843.3	CACUL1-202	6121	418aa	ENSSSCP00000055937.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BHU8 A0A8D0RY78	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000066905.1	CACUL1-203	6916	333aa	ENSSSCP00000061128.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QSF8 A0A8D0X540	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000084720.2	CACUL1-201	2798	383aa	ENSSSCP00000068878.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QVJ1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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