Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: HMGN1 ENSSSCG00000033733

.

Description

high mobility group nucleosome binding domain 1 [Source:UniProtKB Gene Name;Acc:A0A287B4S0]

Location

Primary_assembly 13: 202,905,233-202,943,575 reverse strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 3 transcripts (splice variants), 223 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000039191.3	HMGN1-201	1331	150aa	ENSSSCP00000051428.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B4S0 A0A8D0WGT4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000067587.1	HMGN1-202	2810	101aa	ENSSSCP00000067217.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TKA8 A0A5G2QQN1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000086300.1	HMGN1-203	1635	123aa	ENSSSCP00000072384.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R582 A0A8D0QQK3	-

.

Summary

.

.