Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: COPS7B ENSSSCG00000033334

.

Description

COP9 signalosome subunit 7B [Source:UniProtKB Gene Name;Acc:A0A4X1TFA8]

Location

Primary_assembly 15: 132,427,173-132,450,689 forward strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 5 transcripts (splice variants), 157 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000047636.3	COPS7B-205	1159	294aa	ENSSSCP00000040612.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A9J3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000054797.3	COPS7B-203	2161	280aa	ENSSSCP00000034082.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TFA8 A0A8D0LUK6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000055931.3	COPS7B-204	1642	231aa	ENSSSCP00000031453.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZJ28 A0A4X1THQ9	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000056561.3	COPS7B-202	1119	146aa	ENSSSCP00000046888.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AS45 A0A8D0KBX2	-
ENSSSCT00000073367.1	COPS7B-201	186	62aa	ENSSSCP00000070237.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R7Z5 A0A8D1VNW8	-

.

Summary

.

.