Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
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Genetic Variation
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External references
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ID History
- Gene history

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Gene: CCDC47 ENSSSCG00000028698

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Description

coiled-coil domain containing 47 [Source:VGNC Symbol;Acc:VGNC:97916]

Location

Primary_assembly 12: 15,165,405-15,192,356 forward strand.

Sscrofa11.1:CM000823.5

About this gene

This gene has 4 transcripts (splice variants) and 212 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000030857.4	CCDC47-203	1803	483aa	ENSSSCP00000021016.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0YLX8 I3LAE8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000096919.1	CCDC47-202	2019	449aa	ENSSSCP00000079753.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0MCV4 A0A8W4FLH0	-
ENSSSCT00000091183.2	CCDC47-204	1764	470aa	ENSSSCP00000070050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0I1K2 A0A8D0YK35	-
ENSSSCT00000041694.3	CCDC47-201	702	190aa	ENSSSCP00000045400.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ANC1 A0A8D1IAX1	-

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Summary

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