Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: HDAC11 ENSSSCG00000028031

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Description

histone deacetylase 11 [Source:VGNC Symbol;Acc:VGNC:88812]

Location

Primary_assembly 13: 70,860,658-70,879,856 reverse strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 5 transcripts (splice variants), 196 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000024978.4	HDAC11-202	2528	347aa	ENSSSCP00000027544.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0K8Y6 I3LTU6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000012705.5	HDAC11-201	2314	299aa	ENSSSCP00000012372.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U2W3 F1SPG6	-
ENSSSCT00000085012.2	HDAC11-203	2291	268aa	ENSSSCP00000073709.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U2Y3 A0A8D1HB10	-
ENSSSCT00000079142.2	HDAC11-204	2228	247aa	ENSSSCP00000072417.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U837 A0A8D1PSB8	-
ENSSSCT00000088011.2	HDAC11-205	2030	181aa	ENSSSCP00000071658.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U863 A0A8D1VPL1	-

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Summary

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