Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ITSN1 ENSSSCG00000024614

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Description

intersectin 1 [Source:VGNC Symbol;Acc:VGNC:108669]

Location

Primary_assembly 13: 197,249,061-197,481,245 forward strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 8 transcripts (splice variants), 227 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000078428.2	ITSN1-208	4861	1485aa	ENSSSCP00000063036.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QFN5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000094150.1	ITSN1-205	5158	1220aa	ENSSSCP00000075456.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1U9N5 A0A8W4F9F2	-
ENSSSCT00000040338.3	ITSN1-206	5143	1215aa	ENSSSCP00000038885.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A536	-
ENSSSCT00000077583.2	ITSN1-207	4945	1149aa	ENSSSCP00000060719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2Q9S5 A0A8D1RXJ7	-
ENSSSCT00000100587.1	ITSN1-201	4451	1437aa	ENSSSCP00000078203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FIR4	-
ENSSSCT00000094133.1	ITSN1-204	4089	1263aa	ENSSSCP00000075315.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F917	-
ENSSSCT00000101219.1	ITSN1-202	3007	888aa	ENSSSCP00000074657.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F6B7	-
ENSSSCT00000027819.3	ITSN1-203	2974	878aa	ENSSSCP00000027114.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1RRY3 I3LSM1	-

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Summary

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