Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: OPTN ENSSSCG00000023247

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Description

optineurin [Source:VGNC Symbol;Acc:VGNC:95832]

Location

Primary_assembly 10: 48,530,843-48,582,860 reverse strand.

Sscrofa11.1:CM000821.5

About this gene

This gene has 2 transcripts (splice variants), 209 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000046449.3	OPTN-201	3204	574aa	ENSSSCP00000037462.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S6HC04 Q7YS99	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000045280.3	OPTN-202	3082	528aa	ENSSSCP00000054718.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S6IBX6 A0A8D1SXC8	-

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Summary

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