cytohesin 1 [Source:VGNC Symbol;Acc:VGNC:87135]
Primary_assembly 12: 3,356,245-3,432,641 forward strand.
Sscrofa11.1:CM000823.5
This gene has 5 transcripts (splice variants), 277 orthologues and 14 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000077743.2 | CYTH1-202 | 3020 | 399aa | ENSSSCP00000073339.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2RLR5 A0A8D1IZV4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSSSCT00000088382.2 | CYTH1-201 | 8236 | 390aa | ENSSSCP00000060759.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2Q9V9 A0A8D1ZUD9 | - |
| ENSSSCT00000059624.3 | CYTH1-205 | 3050 | 397aa | ENSSSCP00000040873.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287AAN7 A0A8D1BXP7 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSSSCT00000045109.2 | CYTH1-204 | 3026 | 398aa | ENSSSCP00000057994.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D1D552 M3UZ36 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSSSCT00000018691.5 | CYTH1-203 | 314 | 65aa | ENSSSCP00000018190.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1UMC6 F1RZ72 | - |
