SP110 nuclear body protein [Source:VGNC Symbol;Acc:VGNC:96367]
Primary_assembly 15: 131,169,917-131,226,544 reverse strand.
Sscrofa11.1:CM000826.5
This gene has 9 transcripts (splice variants), 118 orthologues and 23 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000038109.3 | SP110-202 | 2345 | 669aa | ENSSSCP00000053159.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287BAR6 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| ENSSSCT00000041167.2 | SP110-204 | 2294 | 652aa | ENSSSCP00000056418.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287BJT6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000063867.3 | SP110-205 | 2229 | 627aa | ENSSSCP00000045556.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287ANT5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000041160.3 | SP110-208 | 2115 | 626aa | ENSSSCP00000037919.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287A1X3 A0A8D0QIV0 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000062509.3 | SP110-206 | 992 | 218aa | ENSSSCP00000032641.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZLY8 A0A8D0WK29 | - |
| ENSSSCT00000046122.3 | SP110-209 | 971 | 211aa | ENSSSCP00000051505.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287B4U8 | - |
| ENSSSCT00000017706.5 | SP110-207 | 696 | 152aa | ENSSSCP00000017225.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D0WMU0 F1SMZ1 | - |
| ENSSSCT00000047713.3 | SP110-203 | 687 | 195aa | ENSSSCP00000045984.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287APV4 A0A4X1TMK6 | - |
| ENSSSCT00000046261.3 | SP110-201 | 657 | 139aa | ENSSSCP00000036524.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZXU7 A0A8D1BXQ8 | - |
