Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SPHKAP ENSSSCG00000016256

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Description

SPHK1 interactor, AKAP domain containing [Source:VGNC Symbol;Acc:VGNC:96245]

Location

Primary_assembly 15: 129,308,627-129,460,960 reverse strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 3 transcripts (splice variants), 197 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000065098.3	SPHKAP-202	7166	1732aa	ENSSSCP00000058365.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BQB4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000054594.3	SPHKAP-201	7091	1707aa	ENSSSCP00000043902.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AIS8	-
ENSSSCT00000017701.5	SPHKAP-203	5961	1586aa	ENSSSCP00000017220.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SNL0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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