Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ARFIP2 ENSSSCG00000014625

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Description

tripartite motif containing 3 [Source:VGNC Symbol;Acc:VGNC:94405]

Location

Primary_assembly 9: 3,249,908-3,266,686 forward strand.

Sscrofa11.1:CM000820.5

About this gene

This gene has 4 transcripts (splice variants), 269 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000015975.5	ARFIP2-203	3141	431aa	ENSSSCP00000015554.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RMN9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000050270.3	ARFIP2-202	2586	256aa	ENSSSCP00000034194.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SG63 A0A8D0I195	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000083574.2	ARFIP2-204	2114	343aa	ENSSSCP00000062085.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SGA8 A0A5G2QJ85	-
ENSSSCT00000057155.3	ARFIP2-201	1447	267aa	ENSSSCP00000057893.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SGD4 A0A8D0TFK1	-

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Summary

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